Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015790654.1_cds_XP_016502970.1_1571
CDS Infomation

[gene=LOC107821079] [db_xref=GeneID:107821079] [protein=U-box domain-containing protein 9-like] [protein_id=XP_016502970.1] [location=join(8179..8475,9166..10245)] [gbkey=CDS]
Sequence

ATGGCGAAGACAGGTATAGTTGAAGGCGATCCAATTTCAGTGGCGACTGCAAAGGCAGCA
ACAGAGTTGAAAAGGGAGTTACAGAGACTCGTTAAGGCTATTTTATCTGAAGATGAAATC
AATGTGGACGCCATTGATAAAACCCATCAAACCCTTTTCGCCTTAAAAGACCTAAAGCTT
AAACGACAGTCCTCGTTCAGGACTCCACCTGATTCTGCTCGTGTTTTGCCTGATGAATTT
CGCTGCCCACTTTCTAAAGAACTTATGAGGGATCCTGTTATCGTTTCCACCGGTCAGACT
TATGATAGACCCTTCATTCAGAAATGGTTAAATGCTGGAAATAGGACGTGCCCTCGAACA
CAACAAGTGCTTTCACATACAATTCTTACACCTAATCACTTGATTCGCGAGATGATCTCA
CAATGGTGTAAAAATAATGGGATTCAAATGCCAGACCCTGTTCAGTATCTGAATGATGAA
GGGTTGACTGAAGCTGATCGAGATTTATTCTTCTCTTTGCTTGAAAAGATGTCTTCAATA
TTATCTGATCAAAAAGTTGCTGCAAGAGAATTACGTTTGTTAACGAAGAAAATGCCTTCT
TTTCGGGCACTATTTGGAGAATCTGCAGATGCTATTCCTCAACTAATGCGCCCCCTCTCT
CGAAGCAATAGTGGTGTTCATCCGAATCTCCAAGAAGACATAATCACGACACTTTTGAAT
CTTTCCATCCATGACAATAACAAGAAGCTCGTCGCAGAGACTCCAATGGTTGTTCCACTT
CTTATGGACGCATTAAGATCAGGAACGATTGAAACAAGGAGCAATGCAGCTGCTGCCCTT
TTCACACTGTCTGCCCTCGACTCTAATAAAGAGCTTATCGGAAAATCTGGTGCTCTGAAA
CCGCTGGTTGAACTCTTAGATGAAGGGAATCCGGTAGCGATGAAGGATGTTGCTTCAGCT
ATTTTTAGTCTGTGCATTATCCATGATAATAAGGCAAGAGCGGTTAGAGATGGTGCCGTG
AGGGTTATCCTGAAAAAGATAATGAATAACGTGCATGTCGACGAATTGCTAGCCATACTA
GCAATGCTATCAACTAATCAAAAGGCAATTGAGGAAATGGGAGACCTTGGAGCAGTTCCA
TGTTTGGTTAATATAATAAGGGAGACCTCTTGTGCTCGCAGCAAGGAGAATTGTATTGCA
ATCCTTTACACAATCTGTTATACCGACAGAACCAAGTGGAAGATAATAAGGGATGAGGAG
AAAACCTACGGGACAATCTCTCAACTTGCTCAAAATGGTACAGCAAGGGCCAAGAGAAAG
GCCAATGGTATTCTCGACAGACTGAACAGGGCTGTGAATCTTACCCATACTGCATAA

Peptide Sequence

PEP ID

XP_016502970.1
PEP Infomation

PREDICTED: U-box domain-containing protein 9-like [Nicotiana tabacum]
Sequence

MAKTGIVEGDPISVATAKAATELKRELQRLVKAILSEDEINVDAIDKTHQTLFALKDLKL
KRQSSFRTPPDSARVLPDEFRCPLSKELMRDPVIVSTGQTYDRPFIQKWLNAGNRTCPRT
QQVLSHTILTPNHLIREMISQWCKNNGIQMPDPVQYLNDEGLTEADRDLFFSLLEKMSSI
LSDQKVAARELRLLTKKMPSFRALFGESADAIPQLMRPLSRSNSGVHPNLQEDIITTLLN
LSIHDNNKKLVAETPMVVPLLMDALRSGTIETRSNAAAALFTLSALDSNKELIGKSGALK
PLVELLDEGNPVAMKDVASAIFSLCIIHDNKARAVRDGAVRVILKKIMNNVHVDELLAIL
AMLSTNQKAIEEMGDLGAVPCLVNIIRETSCARSKENCIAILYTICYTDRTKWKIIRDEE
KTYGTISQLAQNGTARAKRKANGILDRLNRAVNLTHTA

Transcript Sequence

Gene sequence data has not been registered.